PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572718.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 282aa    MW: 31406.9 Da    PI: 6.6835
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.1e-10756154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +v+ +k+L
  XP_012572718.1  7 RKTQKADREKLRRDRLNEQFVELGNILDPD----RPKNDKATILGDTVQLLKDL 56
                    6788999********************997....79**************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.11E-13676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-13679IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.944656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-7756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.07E-6761No hitNo description
SMARTSM003533.3E-71262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDCTAARKTQ KADREKLRRD RLNEQFVELG NILDPDRPKN DKATILGDTV QLLKDLTSQV  60
SKLKDEHTML NEESRELTQE KNDLREEKAS LKSDIENLNN QYQLQLRTMF PWTAMDHSVM  120
MAPPSYPYPV PMPVPPGPIP MQPYPFYANQ HPAVIPNPCS TYVPFLAPNT IVEQQSTQYV  180
SPPLHPGSRS HVSGKQDSKN KSSRESRAER NEESNDVATD LELKTPGSSA DQDLSSAQKK  240
SSKSSRKESS FTEGSSLGKC SSSYSVQDSS SSSVVGSRKA SE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944371e-155BT094437.1 Soybean clone JCVI-FLGm-24H6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572718.10.0PREDICTED: transcription factor bHLH121 isoform X2
SwissprotQ9LT232e-95BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2RBE11e-167A0A0B2RBE1_GLYSO; Transcription factor bHLH121
TrEMBLI1KTH21e-167I1KTH2_SOYBN; Uncharacterized protein
STRINGGLYMA15G29630.21e-161(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-75bHLH family protein